 |
SNPper - IIPGA PrettyBase Importer |
Goldenpath: hg16
dbSNP: build 118
Login: pgabot |
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| Prettybase importer |
|
| Gene: |
FCER2 |
Region searched: |
chr19:7,649,663-7,682,997 |
| Match orientation: |
Reverse complemented |
Processing time: |
2.23 seconds |
| Total SNPs: |
44 |
Correct: |
3 |
|
|
| Imported SNPs |
|
Position in
refseq |
Absolute
position |
Relative
positions |
AA
change |
All 1 |
All 2 |
All 3 |
All 4 |
Minor allele
frequency |
Base in
refseq |
Known base
(from GoldenPath) |
Known SNP
(from dbSNP) |
Assigned name |
| 12877 |
chr19:7660194 |
10452 A/G |
284 R/Q |
G (62) |
A (2) |
|
|
3% |
G |
G |
rs8102872 |
IIPGA-FCER2-12877 |
| 5721 |
[not matched: out of sequence] |
IIPGA-FCER2-5721 |
| 3616 |
[not matched: out of sequence] |
IIPGA-FCER2-3616 |
| 1163 |
[not matched: out of sequence] |
IIPGA-FCER2-1163 |
| 667 |
[not matched: out of sequence] |
IIPGA-FCER2-667 |
| 457 |
[not matched: out of sequence] |
IIPGA-FCER2-457 |
| 3830 |
[not matched: out of sequence] |
IIPGA-FCER2-3830 |
| 3060 |
[not matched: out of sequence] |
IIPGA-FCER2-3060 |
| 397 |
[not matched: out of sequence] |
IIPGA-FCER2-397 |
| 12016 |
[not matched: out of sequence] |
IIPGA-FCER2-12016 |
| 3655 |
[not matched: out of sequence] |
IIPGA-FCER2-3655 |
| 2804 |
[not matched: out of sequence] |
IIPGA-FCER2-2804 |
| 3556 |
[not matched: out of sequence] |
IIPGA-FCER2-3556 |
| 3550 |
[not matched: out of sequence] |
IIPGA-FCER2-3550 |
| 5866 |
[not matched: out of sequence] |
IIPGA-FCER2-5866 |
| 5093 |
[not matched: out of sequence] |
IIPGA-FCER2-5093 |
| 954 |
[not matched: out of sequence] |
IIPGA-FCER2-954 |
| 11787 |
[not matched: out of sequence] |
IIPGA-FCER2-11787 |
| 11913 |
[not matched: out of sequence] |
IIPGA-FCER2-11913 |
| 2742 |
[not matched: out of sequence] |
IIPGA-FCER2-2742 |
| 3816 |
[not matched: out of sequence] |
IIPGA-FCER2-3816 |
| 1114 |
[not matched: out of sequence] |
IIPGA-FCER2-1114 |
| 2747 |
[not matched: out of sequence] |
IIPGA-FCER2-2747 |
| 1032 |
[not matched: out of sequence] |
IIPGA-FCER2-1032 |
| 930 |
[not matched: out of sequence] |
IIPGA-FCER2-930 |
| 2668 |
[not matched: out of sequence] |
IIPGA-FCER2-2668 |
| 912 |
[not matched: out of sequence] |
IIPGA-FCER2-912 |
| 3603 |
[not matched: out of sequence] |
IIPGA-FCER2-3603 |
| 1139 |
[not matched: out of sequence] |
IIPGA-FCER2-1139 |
| 2723 |
[not matched: out of sequence] |
IIPGA-FCER2-2723 |
| 2761 |
[not matched: out of sequence] |
IIPGA-FCER2-2761 |
| 13256 |
chr19:7659815 |
10831 C/G |
|
C (94) |
G (2) |
|
|
2% |
C |
C |
|
IIPGA-FCER2-13256 |
| 12845 |
[not matched: out of sequence] |
IIPGA-FCER2-12845 |
| 967 |
[not matched: out of sequence] |
IIPGA-FCER2-967 |
| 11858 |
[not matched: out of sequence] |
IIPGA-FCER2-11858 |
| 4285 |
[not matched: out of sequence] |
IIPGA-FCER2-4285 |
| 1367 |
[not matched: out of sequence] |
IIPGA-FCER2-1367 |
| 1457 |
[not matched: out of sequence] |
IIPGA-FCER2-1457 |
| 3097 |
[not matched: out of sequence] |
IIPGA-FCER2-3097 |
| 5930 |
[not matched: out of sequence] |
IIPGA-FCER2-5930 |
| 2792 |
[not matched: out of sequence] |
IIPGA-FCER2-2792 |
| 11845 |
[not matched: out of sequence] |
IIPGA-FCER2-11845 |
| 13491 |
chr19:7659580 |
11066 C/T |
|
C (83) |
T (1) |
|
|
1% |
C |
C |
|
IIPGA-FCER2-13491 |
| 4488 |
[not matched: out of sequence] |
IIPGA-FCER2-4488 |
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| © 2001-2004, Alberto Riva, CHIP |